- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.92 Å
- Oligo State
- monomer
- Ligands
- 1 x ZN: ZINC ION(Non-covalent)
- 1 x ARG: ARGININE(Non-covalent)
- 3 x NA: SODIUM ION(Non-functional Binders)
NA.3: 4 residues within 4Å:- Chain A: S.328, D.329, G.331, R.333
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:D.329, A:R.333
NA.4: 7 residues within 4Å:- Chain A: M.230, D.233, E.234, L.239, E.240, Y.241, Y.295
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:M.230, A:E.234, A:Y.241
- Water bridges: A:Y.295
NA.5: 3 residues within 4Å:- Chain A: Q.15, I.16, L.134
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:I.16, A:I.16, A:L.134
- 11 x GOL: GLYCEROL(Non-functional Binders)
GOL.6: 8 residues within 4Å:- Chain A: L.528, L.538, W.542, L.547, S.559, D.562, A.563, S.566
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:L.528, A:S.559, A:D.562, A:S.566
GOL.7: 4 residues within 4Å:- Chain A: L.57, V.58, S.59, W.70
No protein-ligand interaction detected (PLIP)GOL.8: 4 residues within 4Å:- Chain A: Y.664, R.665, V.666, E.667
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:V.666, A:E.667
GOL.9: 7 residues within 4Å:- Chain A: A.256, G.257, K.270, Y.271, R.779, R.821
- Ligands: GOL.10
6 PLIP interactions:6 interactions with chain A- Hydrogen bonds: A:A.256, A:K.270, A:Y.271, A:R.779, A:R.779, A:R.821
GOL.10: 5 residues within 4Å:- Chain A: R.289, Y.372, Y.377, E.378
- Ligands: GOL.9
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:R.289
GOL.11: 5 residues within 4Å:- Chain A: N.369, Y.372, Q.817, R.821, K.860
5 PLIP interactions:5 interactions with chain A- Hydrogen bonds: A:Y.372, A:Q.817, A:K.860, A:K.860
- Water bridges: A:S.820
GOL.12: 4 residues within 4Å:- Chain A: T.468, P.469, D.470, A.472
No protein-ligand interaction detected (PLIP)GOL.13: 8 residues within 4Å:- Chain A: Y.656, Y.660, R.677, Q.699, A.703, N.704, N.705, D.708
7 PLIP interactions:7 interactions with chain A- Hydrogen bonds: A:Y.656, A:R.677, A:R.677, A:N.704, A:N.704, A:N.705, A:D.708
GOL.14: 4 residues within 4Å:- Chain A: E.65, P.66, W.67, T.68
No protein-ligand interaction detected (PLIP)GOL.15: 3 residues within 4Å:- Chain A: D.195, T.196, K.227
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:K.227, A:K.227
GOL.16: 9 residues within 4Å:- Chain A: L.285, G.331, S.332, V.335, N.336, H.668, I.671, A.672, T.675
8 PLIP interactions:8 interactions with chain A- Hydrogen bonds: A:S.332, A:N.336, A:H.668, A:T.675, A:T.675
- Water bridges: A:S.327, A:N.336, A:H.668
- 2 x MLI: MALONATE ION(Non-functional Binders)
MLI.17: 6 residues within 4Å:- Chain A: D.277, A.703, N.705, M.706, K.734, W.735
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:A.703
- Salt bridges: A:K.734, A:K.734
MLI.18: 6 residues within 4Å:- Chain A: R.637, E.638, T.641, R.682, F.686, A.718
5 PLIP interactions:5 interactions with chain A- Hydrophobic interactions: A:F.686
- Water bridges: A:R.637
- Salt bridges: A:R.637, A:R.637, A:R.682
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Addlagatta, A. et al., Crystal Structure of Met260Ala mutant of E. coli Aminopeptidase N in complex with L-arginine. To Be Published
- Release Date
- 2016-02-10
- Peptides
- Aminopeptidase N: A
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.92 Å
- Oligo State
- monomer
- Ligands
- 1 x ZN: ZINC ION(Non-covalent)
- 1 x ARG: ARGININE(Non-covalent)
- 3 x NA: SODIUM ION(Non-functional Binders)
- 11 x GOL: GLYCEROL(Non-functional Binders)
- 2 x MLI: MALONATE ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Addlagatta, A. et al., Crystal Structure of Met260Ala mutant of E. coli Aminopeptidase N in complex with L-arginine. To Be Published
- Release Date
- 2016-02-10
- Peptides
- Aminopeptidase N: A
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
A