- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.95 Å
- Oligo State
- monomer
- Ligands
- 1 x ZN: ZINC ION(Non-covalent)
- 1 x 3FB: (3S)-3-AMINO-4-PHENYLBUTANOIC ACID(Non-covalent)
- 8 x NA: SODIUM ION(Non-functional Binders)
NA.3: 3 residues within 4Å:- Chain A: Q.15, I.16, L.134
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:I.16, A:L.134, A:L.134
NA.4: 2 residues within 4Å:- Chain A: N.63, T.87
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:N.63, A:T.87, A:T.87
NA.5: 3 residues within 4Å:- Chain A: H.767, R.768, F.770
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:H.767, A:F.770
NA.6: 2 residues within 4Å:- Ligands: NA.10, GOL.15
No protein-ligand interaction detected (PLIP)NA.7: 1 residues within 4Å:- Chain A: Q.160
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:Q.160, A:Q.160
NA.8: 4 residues within 4Å:- Chain A: S.328, D.329, G.331, R.333
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:D.329, A:R.333
NA.9: 2 residues within 4Å:- Chain A: E.103, E.367
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:E.367
- Water bridges: A:E.119, A:N.369
NA.10: 1 residues within 4Å:- Ligands: NA.6
No protein-ligand interaction detected (PLIP)- 22 x GOL: GLYCEROL(Non-functional Binders)
GOL.11: 6 residues within 4Å:- Chain A: K.4, E.119, D.308, W.309, F.310, M.368
Ligand excluded by PLIPGOL.12: 2 residues within 4Å:- Chain A: M.364, D.470
Ligand excluded by PLIPGOL.13: 2 residues within 4Å:- Chain A: K.140, W.169
Ligand excluded by PLIPGOL.14: 8 residues within 4Å:- Chain A: S.59, V.60, P.66, W.67, T.68, W.70
- Ligands: GOL.23, MLI.33
Ligand excluded by PLIPGOL.15: 1 residues within 4Å:- Ligands: NA.6
Ligand excluded by PLIPGOL.16: 0 residues within 4Å:- (No contacts)
Ligand excluded by PLIPGOL.17: 4 residues within 4Å:- Chain A: T.280, D.281, K.282, T.707
Ligand excluded by PLIPGOL.18: 6 residues within 4Å:- Chain A: W.221, E.288, L.330, V.666, E.667, H.668
Ligand excluded by PLIPGOL.19: 5 residues within 4Å:- Chain A: T.389, A.482, C.530, E.531, S.533
Ligand excluded by PLIPGOL.20: 2 residues within 4Å:- Chain A: S.617, E.620
Ligand excluded by PLIPGOL.21: 8 residues within 4Å:- Chain A: A.527, L.528, L.529, W.542, S.559, D.562, A.563, S.566
Ligand excluded by PLIPGOL.22: 6 residues within 4Å:- Chain A: R.10, A.11, P.12, D.13, H.41, G.42
Ligand excluded by PLIPGOL.23: 3 residues within 4Å:- Chain A: T.68, W.70
- Ligands: GOL.14
Ligand excluded by PLIPGOL.24: 2 residues within 4Å:- Chain A: E.405, D.408
Ligand excluded by PLIPGOL.25: 7 residues within 4Å:- Chain A: M.256, Y.372, L.374, Y.377, E.378
- Ligands: GOL.30, MLI.34
Ligand excluded by PLIPGOL.26: 7 residues within 4Å:- Chain A: R.637, E.638, T.641, R.682, F.686, A.718
- Ligands: GOL.28
Ligand excluded by PLIPGOL.27: 7 residues within 4Å:- Chain A: V.618, A.634, T.751, P.753, S.788, N.789
- Ligands: GOL.28
Ligand excluded by PLIPGOL.28: 7 residues within 4Å:- Chain A: A.634, E.638, F.686, A.718, P.753
- Ligands: GOL.26, GOL.27
Ligand excluded by PLIPGOL.29: 8 residues within 4Å:- Chain A: Y.656, R.677, Q.699, E.702, A.703, N.704, N.705, D.708
Ligand excluded by PLIPGOL.30: 8 residues within 4Å:- Chain A: A.258, R.289, V.290, H.293, E.294, Y.377
- Ligands: 3FB.2, GOL.25
Ligand excluded by PLIPGOL.31: 4 residues within 4Å:- Chain A: K.398, Q.401, L.402, E.405
Ligand excluded by PLIPGOL.32: 5 residues within 4Å:- Chain A: L.285, D.286, R.289, S.327, N.336
Ligand excluded by PLIP- 4 x MLI: MALONATE ION(Non-functional Binders)
MLI.33: 6 residues within 4Å:- Chain A: L.57, V.58, S.59, V.60, W.70
- Ligands: GOL.14
3 PLIP interactions:3 interactions with chain A- Hydrophobic interactions: A:L.57
- Hydrogen bonds: A:V.58, A:V.60
MLI.34: 7 residues within 4Å:- Chain A: M.256, G.257, K.270, Y.271, R.779, R.821
- Ligands: GOL.25
7 PLIP interactions:7 interactions with chain A- Hydrogen bonds: A:Y.271
- Water bridges: A:Y.271, A:R.289
- Salt bridges: A:K.270, A:R.779, A:R.779, A:R.821
MLI.35: 6 residues within 4Å:- Chain A: R.434, S.437, Q.438, Q.471, E.473, Q.475
8 PLIP interactions:8 interactions with chain A- Hydrophobic interactions: A:Q.438
- Hydrogen bonds: A:S.437, A:Q.471, A:E.473, A:Q.475, A:Q.475
- Water bridges: A:E.473
- Salt bridges: A:R.434
MLI.36: 6 residues within 4Å:- Chain A: R.779, G.783, G.787, R.821, L.822, P.825
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:G.783, A:G.783
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Addlagatta, A. et al., Crystal Structure of E. coli Aminopeptidase N in complex with L-Beta Homophenylalanine. To Be Published
- Release Date
- 2016-03-02
- Peptides
- Aminopeptidase N: A
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.95 Å
- Oligo State
- monomer
- Ligands
- 1 x ZN: ZINC ION(Non-covalent)
- 1 x 3FB: (3S)-3-AMINO-4-PHENYLBUTANOIC ACID(Non-covalent)
- 8 x NA: SODIUM ION(Non-functional Binders)
- 22 x GOL: GLYCEROL(Non-functional Binders)
- 4 x MLI: MALONATE ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Addlagatta, A. et al., Crystal Structure of E. coli Aminopeptidase N in complex with L-Beta Homophenylalanine. To Be Published
- Release Date
- 2016-03-02
- Peptides
- Aminopeptidase N: A
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
A