SMTL ID : 4xoq.2 (1 other biounit)

F420 complex of coenzyme F420:L-glutamate ligase (FbiB) from Mycobacterium tuberculosis (C-terminal domain)

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.05 Å

Oligo State

homo-dimer

Ligands

2 x F42: COENZYME F420(Non-covalent)

F42.1: 13 residues within 4Å: Chain A: M.72, W.76, D.79, R.93, G.97, I.157, S.159, F.162 Chain B: H.117, Y.119, R.124, E.128, M.131 11 PLIP interactions: 10 interactions with chain A, 1 interactions with chain B Hydrophobic interactions: A:W.76, A:F.162 Hydrogen bonds: A:D.79, A:D.79, A:S.159 Salt bridges: A:R.93, B:H.117 pi-Stacking: A:W.76, A:W.76, A:W.76, A:W.76 F42.3: 10 residues within 4Å: Chain A: Y.119, R.124 Chain B: M.72, K.75, W.76, D.79, G.97, I.157, S.159, F.162 10 PLIP interactions: 8 interactions with chain B, 2 interactions with chain A Hydrophobic interactions: B:W.76, B:F.162 Hydrogen bonds: B:D.79, B:S.159, A:Y.119, A:R.124 pi-Stacking: B:W.76, B:W.76, B:W.76, B:W.76

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 5 residues within 4Å: Chain A: R.19, R.20, S.21, R.195 Chain B: P.46 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:S.21, A:S.21 Salt bridges: A:R.19, A:R.195

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bashiri, G. et al., Elongation of the Poly-gamma-glutamate Tail of F420 Requires Both Domains of the F420: gamma-Glutamyl Ligase (FbiB) of Mycobacterium tuberculosis. J.Biol.Chem. (2016)

Release Date

2016-02-17

Peptides

Coenzyme F420:L-glutamate ligase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
D

Coenzyme F420:L-glutamate ligase

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