SMTL ID : 4xp7.1

Crystal structure of Human tRNA dihydrouridine synthase 2

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

monomer

Ligands

1 x FNR: 1-DEOXY-1-(7,8-DIMETHYL-2,4-DIOXO-3,4-DIHYDRO-2H-BENZO[G]PTERIDIN-1-ID-10(5H)-YL)-5-O-PHOSPHONATO-D-RIBITOL(Non-covalent)

FNR.1: 17 residues within 4Å: Chain A: A.23, P.24, M.25, V.26, E.49, Q.93, N.119, K.161, H.189, N.220, G.221, G.222, S.223, V.247, A.248, R.249, M.252 22 PLIP interactions: 22 interactions with chain A Hydrophobic interactions: A:M.25, A:R.249 Hydrogen bonds: A:P.24, A:V.26, A:E.49, A:Q.93, A:Q.93, A:K.161, A:K.161, A:K.161, A:N.220, A:G.221, A:S.223, A:S.223, A:A.248, A:R.249 Water bridges: A:N.119, A:N.119, A:H.189, A:G.222, A:G.222 Salt bridges: A:R.249

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Whelan, F. et al., From bacterial to human dihydrouridine synthase: automated structure determination. Acta Crystallogr.,Sect.D (2015)

Release Date

2015-01-28

Peptides

tRNA-dihydrouridine(20) synthase [NAD(P)+]-like: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

tRNA-dihydrouridine(20) synthase [NAD(P)+]-like