SMTL ID : 4xpj.1

Crystal structure of Nerve growth factor in complex with lysophosphatidylinositol

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.61 Å

Oligo State

homo-dimer

Ligands

1 x LPY: (2R)-2-hydroxy-3-{[(S)-hydroxy{[(1S,2R,3R,4S,5S,6R)-2,3,4,5,6-pentahydroxycyclohexyl]oxy}phosphoryl]oxy}propyl tridecanoate(Non-covalent)

LPY.1: 8 residues within 4Å: Chain A: K.88, W.99 Chain B: V.48, F.49, R.50, Y.52, K.88, W.99 6 PLIP interactions: 1 interactions with chain A, 5 interactions with chain B Salt bridges: A:K.88 Hydrophobic interactions: B:W.99, B:W.99, B:W.99 Hydrogen bonds: B:R.50, B:Y.52

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Sun, H.L. et al., The structure of nerve growth factor in complex with lysophosphatidylinositol. Acta Crystallogr.,Sect.F (2015)

Release Date

2015-07-15

Peptides

Beta-nerve growth factor: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Beta-nerve growth factor

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