SMTL ID : 4xq0.1

Structure of fission yeast RNA polymerase II CTD phosphatase Fcp1-R271A bound to beryllium fluoride

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.85 Å

Oligo State

monomer

Ligands

5 x PG4: TETRAETHYLENE GLYCOL(Non-functional Binders)

PG4.1: 8 residues within 4Å: Chain A: T.37, E.40, W.41, D.44, N.47, A.211, Q.214, N.215 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.47 PG4.2: 7 residues within 4Å: Chain A: K.17, L.90, H.249, A.250, Y.253, E.254, N.257 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:E.254 Water bridges: A:K.17, A:K.17, A:H.249, A:H.249 PG4.3: 10 residues within 4Å: Chain A: K.165, V.166, V.167, E.237, R.240, V.244, S.359, Q.360, W.361 Ligands: PG4.4 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:V.167 Water bridges: A:K.165, A:V.166 PG4.4: 5 residues within 4Å: Chain A: K.243, V.244, D.247, W.361 Ligands: PG4.3 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:W.361 PG4.5: 6 residues within 4Å: Chain A: R.153, G.154, D.155, W.159, D.304, W.308 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:G.154, A:D.155, A:D.155 Water bridges: A:K.165

1 x MG: MAGNESIUM ION(Non-covalent)

MG.6: 4 residues within 4Å: Chain A: D.24, D.26, D.151, D.152 4 PLIP interactions: 2 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:D.26, A:D.152, H2O.3, H2O.3

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Schwer, B. et al., Genetic and structural analysis of the essential fission yeast RNA polymerase II CTD phosphatase Fcp1. Rna (2015)

Release Date

2015-03-04

Peptides

RNA polymerase II subunit A C-terminal domain phosphatase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

RNA polymerase II subunit A C-terminal domain phosphatase

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