SMTL ID : 4xsk.1

Structure of PAItrap, an uPA mutant

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.50 Å

Oligo State

monomer

Ligands

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 5 residues within 4Å: Chain A: H.46, Q.195, G.196, D.197, A.198 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:G.196, A:D.197, A:A.198, A:S.217 Water bridges: A:Q.195 Salt bridges: A:H.46 SO4.2: 3 residues within 4Å: Chain A: Q.169, P.170, H.171 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:H.171 Salt bridges: A:H.171

2 x PGE: TRIETHYLENE GLYCOL(Non-functional Binders)

PGE.3: 8 residues within 4Å: Chain A: G.132, K.160, L.161, I.162, A.185, D.186, P.187, W.189 1 PLIP interactions: 1 interactions with chain A Water bridges: A:E.166 PGE.4: 1 residues within 4Å: Chain A: N.67 No protein-ligand interaction detected (PLIP)

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.5: 4 residues within 4Å: Chain A: H.95, N.96, T.178, K.180 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:N.96, A:T.178, A:K.180 GOL.6: 4 residues within 4Å: Chain A: S.163, H.164, R.165, R.233 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:S.163, A:H.164, A:R.165, A:R.233, A:R.233

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Gong, L. et al., Structure of PAItrap, an uPA mutant. To Be Published

Release Date

2016-02-03

Peptides

Urokinase-type plasminogen activator: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
U

Urokinase-type plasminogen activator