SMTL ID : 4xuq.2 (2 other biounits)

Structure of the CBM22-2 xylan-binding domain from Paenibacillus barcinonensis Xyn10C in complex with xylotriose

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.95 Å

Oligo State

monomer

Ligands

2 x XYP: beta-D-xylopyranose(Non-covalent)

XYP.1: 7 residues within 4Å: Chain A: R.31, Y.59, Y.110, Y.145, E.147, W.150 Ligands: XYP.2 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:R.31, A:Y.145, A:E.147 XYP.2: 5 residues within 4Å: Chain A: R.31, Y.59, Y.110, W.150 Ligands: XYP.1 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.31 Salt bridges: A:R.31

1 x CA: CALCIUM ION(Non-covalent)

CA.3: 5 residues within 4Å: Chain A: D.19, E.21, S.46, R.48, D.167 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.19, A:E.21, A:S.46, A:R.48, H2O.1

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Sainz-Polo, M.A. et al., Exploring Multimodularity in Plant Cell Wall Deconstruction: STRUCTURAL AND FUNCTIONAL ANALYSIS OF Xyn10C CONTAINING THE CBM22-1-CBM22-2 TANDEM. J.Biol.Chem. (2015)

Release Date

2015-06-03

Peptides

Endo-1,4-beta-xylanase C: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Endo-1,4-beta-xylanase C

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