Toggle navigation
Modelling
myWorkspace
Alignment Mode
User Template Mode
DeepView Project Mode
Modelling API
Template Library
Repository
SWISS-MODEL Repository
Repository API
3D-Beacons API
Annotation Projects
TBvar3D
Tools
Structure Assessment
Structure Comparison
QMEAN
Documentation
SWISS-MODEL
Examples
Video Tutorial
New Features
SWISS-MODEL Repository
QMEAN
Structure Assessment
Structure Comparison
TBvar3D
Protein Structure Course
References
Log in
Create Account
SMTL ID : 4xxh.1
TREHALOSE REPRESSOR FROM ESCHERICHIA COLI
Coordinates
PDB Format
Compare
Method
X-RAY DIFFRACTION 2.40 Å
Oligo State
homo-dimer
Ligands
2 x
GLC
-
G6P
:
6-O-phosphono-alpha-D-glucopyranose-(1-1)-alpha-D-glucopyranose
(Non-covalent)
GLC-G6P.1:
22 residues within 4Å:
Chain A:
T.10
,
R.11
,
S.14
,
L.15
,
S.16
,
E.17
,
F.42
,
F.65
,
G.66
,
F.67
,
L.85
,
A.86
,
R.87
,
D.127
,
T.129
,
T.130
,
R.134
,
L.156
,
T.180
,
T.182
,
V.204
,
Y.224
9
PLIP interactions
:
9 interactions with chain A
Hydrogen bonds:
A:L.15
,
A:S.16
,
A:S.16
,
A:R.134
,
A:R.134
,
A:T.182
,
A:T.182
,
A:T.182
,
A:Y.224
,
A:R.11
,
A:E.17
,
A:E.17
,
A:G.66
,
A:R.87
,
A:R.87
,
A:D.127
,
A:D.127
,
A:T.129
Water bridges:
A:T.130
,
A:T.130
,
A:T.182
,
A:Y.224
,
A:Y.224
Salt bridges:
A:R.11
,
A:R.11
GLC-G6P.2:
22 residues within 4Å:
Chain B:
T.10
,
R.11
,
S.14
,
L.15
,
S.16
,
E.17
,
F.42
,
F.65
,
G.66
,
F.67
,
L.85
,
A.86
,
R.87
,
D.127
,
T.129
,
T.130
,
R.134
,
L.156
,
T.180
,
T.182
,
V.204
,
Y.224
8
PLIP interactions
:
8 interactions with chain B
Hydrogen bonds:
B:L.15
,
B:S.16
,
B:S.16
,
B:T.130
,
B:R.134
,
B:R.134
,
B:T.182
,
B:Y.224
,
B:Y.224
,
B:Y.224
,
B:R.11
,
B:E.17
,
B:G.66
,
B:R.87
,
B:R.87
,
B:D.127
,
B:T.129
,
B:T.130
Water bridges:
B:T.130
,
B:T.130
,
B:L.156
,
B:T.180
,
B:D.181
,
B:T.182
Salt bridges:
B:R.11
,
B:R.11
Links
RCSB
PDBe
PDBe-KB
PDBj
PDBsum
CATH
PLIP
Citation
Hars, U. et al., CRYSTAL STRUCTURE OF THE EFFECTOR-BINDING DOMAIN OF THE TREHALOSE-REPRESSOR OF ESCHERICHIA COLI, A MEMBER OF THE LACI FAMILY, IN ITS COMPLEXES WITH INDUCER TREHALOSE-6-PHOSPHATE AND NONINDUCER TREHALOSE. PROTEIN SCI. (1998)
Release Date
2015-02-11
Peptides
HTH-type transcriptional regulator TreR:
A
B
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A
B
B
Export Alignment
FASTA format
Clustal Format
PNG Image
Secondary Structure
None
DSSP
PSIPRED
SSpro
Colour Scheme
Fade Mismatches
Enhance Mismatches
Chain
Unique Chain
Rainbow
2° Structure
Bfactor
Bfactor Range
SOA
Entropy
Clustal
Hydrophobic
Size
Charged
Polar
Proline
Ser/Thr
Cysteine
Aliphatic
Aromatic
No Colour
Background
3D Viewer
NGL
PV
2D
FASTA
Multi FASTA
ClustalW
PNG
HTH-type transcriptional regulator TreR
Toggle Identical (AB)
Cartoon
Cartoon
Tube
Trace
Lines
Ball+Stick
Licorice
Hyperball
Rope
Surface
Spacefill
Outline
Fog
Background
Transparent
Resolution
Low
Medium
High
Extreme