SMTL ID : 4y0s.1

Goat beta-lactoglobulin complex with pramocaine (GLG-PRM)

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

homo-dimer

Ligands

2 x PX9: Pramocaine(Non-covalent)

PX9.1: 14 residues within 4Å: Chain A: V.41, L.46, L.54, I.56, L.58, K.60, E.62, I.71, I.84, V.92, V.94, L.103, F.105, M.107 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:V.41, A:V.41, A:L.46, A:L.54, A:L.58, A:I.84, A:V.92, A:V.94, A:L.103, A:F.105, A:F.105 PX9.4: 14 residues within 4Å: Chain B: V.41, L.46, L.54, I.56, L.58, K.60, E.62, I.71, I.84, V.92, V.94, L.103, F.105, M.107 11 PLIP interactions: 11 interactions with chain B Hydrophobic interactions: B:V.41, B:V.41, B:L.46, B:L.54, B:L.58, B:I.84, B:V.92, B:V.94, B:L.103, B:F.105, B:F.105

4 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 2 residues within 4Å: Chain A: T.76, K.77 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:K.77 Water bridges: A:K.77 Salt bridges: A:K.77 SO4.3: 4 residues within 4Å: Chain A: T.49, P.50, E.51, N.53 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:T.49, A:E.51, A:N.53 SO4.5: 2 residues within 4Å: Chain B: T.76, K.77 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:K.77 Water bridges: B:K.77 Salt bridges: B:K.77 SO4.6: 4 residues within 4Å: Chain B: T.49, P.50, E.51, N.53 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:T.49, B:E.51, B:N.53

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Loch, J.I. et al., beta-Lactoglobulin interactions with local anaesthetic drugs - Crystallographic and calorimetric studies. Int.J.Biol.Macromol. (2015)

Release Date

2015-07-01

Peptides

Beta-lactoglobulin: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Beta-lactoglobulin

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