SMTL ID : 4y0w.1

YeaZ from Pseudomonas aeruginosa

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

homo-10-mer

Ligands

8 x NA: SODIUM ION(Non-functional Binders)

NA.1: 5 residues within 4Å: Chain A: D.123, A.124, D.127, E.128, Y.175 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:A.124, A:D.127, A:E.128, A:Y.175, A:Y.175 NA.2: 5 residues within 4Å: Chain A: D.14, T.15, S.16, T.17, A.19 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:S.16, A:T.17, A:A.19 NA.3: 5 residues within 4Å: Chain B: D.123, A.124, D.127, E.128, Y.175 5 PLIP interactions: 5 interactions with chain B Hydrogen bonds: B:A.124, B:A.124, B:D.127, B:E.128, B:Y.175 NA.4: 5 residues within 4Å: Chain C: D.123, A.124, D.127, E.128, Y.175 3 PLIP interactions: 3 interactions with chain C Hydrogen bonds: C:D.123, C:A.124, C:D.127 NA.5: 5 residues within 4Å: Chain F: D.123, A.124, D.127, E.128, Y.175 4 PLIP interactions: 4 interactions with chain F Hydrogen bonds: F:A.124, F:D.127, F:E.128, F:Y.175 NA.6: 5 residues within 4Å: Chain F: D.14, T.15, S.16, T.17, A.19 4 PLIP interactions: 4 interactions with chain F Hydrogen bonds: F:D.14, F:S.16, F:T.17, F:T.17 NA.7: 5 residues within 4Å: Chain G: D.123, A.124, D.127, E.128, Y.175 4 PLIP interactions: 4 interactions with chain G Hydrogen bonds: G:D.123, G:A.124, G:D.127, G:E.128 NA.8: 5 residues within 4Å: Chain H: D.123, A.124, D.127, E.128, Y.175 3 PLIP interactions: 3 interactions with chain H Hydrogen bonds: H:A.124, H:A.124, H:D.127

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Vecchietti, D. et al., Crystal structure of YeaZ from Pseudomonas aeruginosa. Biochem.Biophys.Res.Commun. (2016)

Release Date

2016-01-27

Peptides

YeaZ: ABCDEFGHIJ

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

E
E

F
A

G
B

H
C

I
D

J
E

YeaZ