SMTL ID : 4y0x.1

Crystal structure of the S/T protein kinase PknG from Mycobacterium tuberculosis in complex with ADP

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.74 Å

Oligo State

monomer

Ligands

1 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)

ADP.1: 16 residues within 4Å: Chain A: I.127, A.128, G.130, G.131, L.132, V.149, K.151, V.181, M.202, E.203, Y.204, V.205, N.251, I.262, D.263 Ligands: MG.3 15 PLIP interactions: 15 interactions with chain A Hydrogen bonds: A:G.131, A:L.132, A:E.203, A:V.205, A:D.263 Water bridges: A:G.130, A:G.130, A:K.151, A:K.151, A:E.250, A:N.251, A:D.263, A:D.263 Salt bridges: A:K.151, A:K.151

1 x ZN: ZINC ION(Non-covalent)

ZN.2: 4 residues within 4Å: Chain A: C.76, C.79, C.98, C.101 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.76, A:C.79, A:C.98, A:C.101

2 x MG: MAGNESIUM ION(Non-covalent)

MG.3: 3 residues within 4Å: Chain A: N.251, D.263 Ligands: ADP.1 3 PLIP interactions: 1 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:D.263, H2O.1, H2O.2 MG.4: 1 residues within 4Å: Chain A: D.263 5 PLIP interactions: 1 interactions with chain A, 4 Ligand-Water interactions Metal complexes: A:D.263, H2O.1, H2O.1, H2O.2, H2O.7

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lisa, M.N. et al., Molecular Basis of the Activity and the Regulation of the Eukaryotic-like S/T Protein Kinase PknG from Mycobacterium tuberculosis. Structure (2015)

Release Date

2015-05-20

Peptides

Serine/threonine-protein kinase PknG: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Serine/threonine-protein kinase PknG

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