SMTL ID : 4y61.1

Crystal structure of the complex between Slitrk2 LRR1 and PTP delta Ig1-Fn1

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 3.36 Å

Oligo State

hetero-1-1-mer

Ligands

4 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.1: 1 residues within 4Å: Chain A: N.234 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.234 NAG.2: 3 residues within 4Å: Chain A: S.277, N.279, Q.296 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:N.279, A:N.279, A:Q.296 NAG.3: 4 residues within 4Å: Chain B: K.194, N.219, T.221, D.223 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:N.219 NAG.4: 3 residues within 4Å: Chain B: E.81, V.83, N.84 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:N.84

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Yamagata, A. et al., Structure of Slitrk2-PTP delta complex reveals mechanisms for splicing-dependent trans-synaptic adhesion. Sci Rep (2015)

Release Date

2015-06-03

Peptides

Receptor-type tyrosine-protein phosphatase delta: A
SLIT and NTRK-like protein 2: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Receptor-type tyrosine-protein phosphatase delta

SLIT and NTRK-like protein 2