SMTL ID : 4yb1.1

20A Mutant c-di-GMP Vc2 Riboswitch bound with 3',3'-cGAMP

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.08 Å

Oligo State

monomer

Ligands

1 x MG: MAGNESIUM ION(Non-functional Binders)

MG.1: 2 residues within 4Å: Chain A: G.34, G.35 No protein-ligand interaction detected (PLIP)

1 x 4BW: 2-amino-9-[(2R,3R,3aS,5R,7aR,9R,10R,10aS,12R,14aR)-9-(6-amino-9H-purin-9-yl)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecin-2-yl]-1,9-dihydro-6H-purin-6-one(Non-functional Binders)

4BW.2: 11 residues within 4Å: Chain A: G.7, A.9, C.10, A.11, G.12, A.13, G.14, C.39, A.40, C.86, C.87 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ren, A. et al., Structural Basis for Molecular Discrimination by a 3',3'-cGAMP Sensing Riboswitch. Cell Rep (2015)

Release Date

2015-04-15

Peptides

U1 small nuclear ribonucleoprotein A: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

B
P

U1 small nuclear ribonucleoprotein A