SMTL ID : 4ybg.1

Crystal structure of the MAEL domain of Drosophila melanogaster Maelstrom

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.60 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: E.53, C.210, H.213, C.222 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:E.53, A:C.210, A:H.213, A:C.222

1 x ACT: ACETATE ION(Non-functional Binders)

ACT.2: 5 residues within 4Å: Chain A: F.197, K.198, D.200, R.229, W.230 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:F.197, A:K.198 Salt bridges: A:R.229

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.3: 6 residues within 4Å: Chain A: K.22, H.25, D.26, L.27, E.28, V.180 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:K.22, A:L.27, A:E.28

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Matsumoto, N. et al., Crystal Structure and Activity of the Endoribonuclease Domain of the piRNA Pathway Factor Maelstrom. Cell Rep (2015)

Release Date

2015-04-29

Peptides

Protein maelstrom: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Protein maelstrom