SMTL ID : 4yc4.1

Crystal structure of phosphatidyl inositol 4-kinase II alpha in complex with nucleotide analog

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.58 Å

Oligo State

monomer

Ligands

1 x M59: [(1S,3S,4S)-3-(6-amino-9H-purin-9-yl)bicyclo[2.2.1]hept-1-yl]methanol(Non-covalent)

M59.1: 9 residues within 4Å: Chain A: Q.61, F.68, V.79, Q.349, L.350, F.351, V.352, I.433, D.434 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:Q.61, A:F.68, A:I.433 Hydrogen bonds: A:Q.349, A:V.352, A:D.434

1 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)

ADP.2: 9 residues within 4Å: Chain A: W.447, R.448, P.451, F.452, Y.453, A.455, W.456, V.532, Q.533 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:F.452, A:F.452, A:V.532, A:Q.533 Salt bridges: A:R.448 pi-Stacking: A:W.447, A:W.447

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Klima, M. et al., The high-resolution crystal structure of phosphatidylinositol 4-kinase II beta and the crystal structure of phosphatidylinositol 4-kinase II alpha containing a nucleoside analogue provide a structural basis for isoform-specific inhibitor design. Acta Crystallogr.,Sect.D (2015)

Release Date

2015-07-15

Peptides

Phosphatidylinositol 4-kinase type 2-alpha,Lysozyme,Phosphatidylinositol 4-kinase type 2-alpha: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Phosphatidylinositol 4-kinase type 2-alpha,Lysozyme,Phosphatidylinositol 4-kinase type 2-alpha

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