SMTL ID : 4yc8.2 (1 other biounit)

C-Helix-Out Binding of Dasatinib Analog to c-Abl Kinase

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.90 Å

Oligo State

monomer

Ligands

1 x 4B7: 2-({6-[4-(2-hydroxyethyl)piperazin-1-yl]-2-methylpyrimidin-4-yl}amino)-N-(4-phenoxyphenyl)-1,3-thiazole-5-carboxamide(Non-covalent)

4B7.1: 18 residues within 4Å: Chain A: L.23, A.44, K.46, F.58, E.61, A.62, M.65, I.88, I.89, T.90, E.91, F.92, M.93, T.94, Y.95, G.96, L.145, F.157 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:L.23, A:K.46, A:E.61, A:I.88, A:T.90, A:F.92, A:F.157 Hydrogen bonds: A:T.90, A:T.90, A:M.93, A:M.93 pi-Stacking: A:F.157

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 5 residues within 4Å: Chain A: H.136, R.137, D.138, G.158, S.160 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:H.136

1 x MES: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID(Non-covalent)

MES.3: 6 residues within 4Å: Chain A: R.142, P.177, I.178, K.179, W.180, L.220 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:I.178, A:K.179 Salt bridges: A:K.179

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kwarcinski, F.E. et al., Conformation-Selective Analogues of Dasatinib Reveal Insight into Kinase Inhibitor Binding and Selectivity. Acs Chem.Biol. (2016)

Release Date

2016-03-02

Peptides

Tyrosine-protein kinase ABL1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Tyrosine-protein kinase ABL1

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