SMTL ID : 4ycv.1 (1 other biounit)

Crystal structure of cladosporin in complex with plasmodium lysyl-tRNA synthetase

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.41 Å

Oligo State

homo-dimer

Ligands

2 x KRS: cladosporin(Non-covalent)

KRS.1: 12 residues within 4Å: Chain A: R.255, E.257, T.262, H.263, N.264, F.267, E.425, V.426, N.428, L.480, R.484, I.495 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:H.263, A:F.267, A:E.425, A:N.428 Hydrogen bonds: A:E.257, A:N.264 Salt bridges: A:R.484 pi-Stacking: A:H.263, A:F.267 KRS.2: 13 residues within 4Å: Chain B: R.255, T.262, H.263, N.264, F.267, S.269, E.425, V.426, N.428, G.479, L.480, G.481, R.484 6 PLIP interactions: 6 interactions with chain B Hydrophobic interactions: B:H.263, B:N.428 Hydrogen bonds: B:N.264 Salt bridges: B:R.484 pi-Stacking: B:H.263, B:F.267

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Fang, P. et al., Structural Basis for Specific Inhibition of tRNA Synthetase by an ATP Competitive Inhibitor. Chem.Biol. (2015)

Release Date

2015-06-24

Peptides

Lysine--tRNA ligase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Lysine--tRNA ligase

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