SMTL ID : 4yd0.1

Influenza polymerase basic protein 2 (PB2) bound to an azaindole-tetrazole inhibitor

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.62 Å

Oligo State

monomer

Ligands

1 x 4EW: 2-(5-chloro-1H-pyrrolo[2,3-b]pyridin-3-yl)-5-fluoro-N-[(1R,2S,3S,4R)-3-(1H-tetrazol-5-yl)bicyclo[2.2.2]oct-2-yl]pyrimidin-4-amine(Non-covalent)

4EW.1: 13 residues within 4Å: Chain A: S.7, F.9, S.10, F.11, S.23, R.41, H.43, E.47, F.49, K.62, F.90, Q.92, M.117 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:F.9, A:F.9, A:F.9, A:F.11 Hydrogen bonds: A:S.7, A:S.23, A:E.47 Water bridges: A:N.115 pi-Stacking: A:F.9, A:H.43, A:H.43, A:F.90

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Boyd, M.J. et al., Isosteric replacements of the carboxylic acid of drug candidate VX-787: Effect of charge on antiviral potency and kinase activity of azaindole-based influenza PB2 inhibitors. Bioorg.Med.Chem.Lett. (2015)

Release Date

2015-04-15

Peptides

Polymerase basic protein 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Polymerase basic protein 2

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