SMTL ID : 4yer.1

Crystal structure of an ABC transporter ATP-binding protein (TM_1403) from Thermotoga maritima MSB8 at 2.35 A resolution

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.35 Å

Oligo State

homo-dimer

Ligands

2 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)

ADP.1: 15 residues within 4Å: Chain A: F.15, F.18, A.20, P.39, N.40, G.41, A.42, G.43, K.44, T.45, T.46 Chain B: T.136, F.137, S.138, M.141 17 PLIP interactions: 13 interactions with chain A, 4 interactions with chain B Hydrogen bonds: A:G.41, A:G.41, A:A.42, A:G.43, A:K.44, A:T.45, A:T.46, A:T.46, B:T.136, B:S.138 Water bridges: A:N.40, A:K.44, B:S.138, B:G.140 Salt bridges: A:K.44 pi-Stacking: A:F.15, A:F.15 ADP.4: 15 residues within 4Å: Chain A: K.135, T.136, F.137, S.138 Chain B: F.15, F.18, A.20, P.39, N.40, G.41, A.42, G.43, K.44, T.45, T.46 12 PLIP interactions: 2 interactions with chain A, 10 interactions with chain B Hydrogen bonds: A:K.135, A:S.138, B:G.41, B:G.41, B:A.42, B:G.43, B:K.44, B:T.45, B:T.46, B:T.46 Salt bridges: B:K.44 pi-Stacking: B:F.15

2 x CL: CHLORIDE ION(Non-functional Binders)

CL.2: 2 residues within 4Å: Chain A: D.211, K.214 Ligand excluded by PLIP CL.3: 6 residues within 4Å: Chain A: H.195, Y.196, E.309 Chain B: H.195, Y.196, E.309 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Joint Center for Structural Genomics (JCSG), Crystal structure of an ABC transporter ATP-binding protein (TM_1403) from Thermotoga maritima MSB8 at 2.35 A resolution. To be published

Release Date

2015-03-11

Peptides

ABC transporter ATP-binding protein: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

ABC transporter ATP-binding protein