SMTL ID : 4yfg.1

Crystal structure of PTP delta meA3/meB minus variant Ig1-Fn1

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 3.49 Å

Oligo State

homo-dimer

Ligands

4 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.1: 1 residues within 4Å: Chain A: N.224 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.224 NAG.2: 4 residues within 4Å: Chain A: S.267, A.268, N.269, Q.286 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:N.269, A:Q.286 NAG.3: 1 residues within 4Å: Chain B: N.224 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:N.224 NAG.4: 2 residues within 4Å: Chain B: N.269, Q.286 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:Q.286

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Yamagata, A. et al., Mechanisms of splicing-dependent trans-synaptic adhesion by PTP delta-IL1RAPL1/IL-1RAcP for synaptic differentiation. Nat Commun (2015)

Release Date

2015-05-06

Peptides

Receptor-type tyrosine-protein phosphatase delta: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
A

Receptor-type tyrosine-protein phosphatase delta