SMTL ID : 4yjz.1

Human antibody H2526 in complex with influenza hemagglutinin H1 Solomon Islands/03/2006

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.72 Å

Oligo State

hetero-1-1-mer

Ligands

3 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.1: 3 residues within 4Å: Chain A: N.7, K.35, E.39 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:N.7 Hydrogen bonds: A:N.7, A:K.35, A:E.39, A:E.39 NAG.2: 6 residues within 4Å: Chain A: N.17, E.19, N.40, C.43, S.87, R.173 No protein-ligand interaction detected (PLIP) NAG.3: 2 residues within 4Å: Chain A: P.77, N.78 1 PLIP interactions: 1 interactions with chain A Water bridges: A:N.78

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Schmidt, A.G. et al., Viral receptor-binding site antibodies with diverse germline origins. Cell (2015)

Release Date

2015-05-27

Peptides

Hemagglutinin: A
scFv H2526: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
E

B
L

Hemagglutinin

scFv H2526