SMTL ID : 4yo7.1

Crystal Structure of an ABC transporter solute binding protein (IPR025997) from Bacillus halodurans C-125 (BH2323, TARGET EFI-511484) with bound myo-inositol

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.70 Å

Oligo State

monomer

Ligands

3 x MG: MAGNESIUM ION(Non-covalent)(Non-functional Binders)

MG.1: 2 residues within 4Å: Chain A: G.41, D.42 3 PLIP interactions: 1 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:G.41, H2O.3, H2O.3 MG.2: 6 residues within 4Å: Chain A: L.253, D.254, V.256, I.257, V.258, D.277 5 PLIP interactions: 2 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:L.253, A:V.256, H2O.9, H2O.10, H2O.12 MG.3: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP)

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.4: 3 residues within 4Å: Chain A: D.56, E.57, E.238 Ligand excluded by PLIP

1 x INS: 1,2,3,4,5,6-HEXAHYDROXY-CYCLOHEXANE(Non-covalent)

INS.5: 9 residues within 4Å: Chain A: D.56, F.58, L.59, N.133, R.134, R.186, N.236, D.262, Q.282 15 PLIP interactions: 15 interactions with chain A Hydrogen bonds: A:D.56, A:D.56, A:L.59, A:N.133, A:R.134, A:R.134, A:R.186, A:R.186, A:N.236, A:D.262, A:Q.282, A:Q.282 Water bridges: A:D.56, A:E.57, A:E.238

1 x NA: SODIUM ION(Non-functional Binders)

NA.6: 5 residues within 4Å: Chain A: I.194, E.195, H.197, D.198, L.200 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:L.200

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Yadava, U. et al., Crystal Structure of an ABC transporter solute binding protein (IPR025997) from Bacillus halodurans C-125 (BH2323, TARGET EFI-511484) with bound myo-inositol. To be published

Release Date

2015-03-25

Peptides

Sugar ABC transporter (Sugar-binding protein): A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Sugar ABC transporter (Sugar-binding protein)