SMTL ID : 4yoo.1

p107 pocket domain in complex with LIN52 P29A peptide

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

hetero-1-1-mer

Ligands

4 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 6 residues within 4Å: Chain A: Y.55, R.73, L.123, S.128, P.129, R.130 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Y.55 Salt bridges: A:R.73, A:R.130 SO4.2: 2 residues within 4Å: Chain A: G.219, S.220 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:S.220 Water bridges: A:S.220, A:L.221 SO4.3: 3 residues within 4Å: Chain A: R.9, S.161, R.162 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:R.162 Water bridges: A:R.9, A:D.163 Salt bridges: A:R.9, A:R.162 SO4.4: 3 residues within 4Å: Chain A: R.237, E.248, R.250 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:E.248 Salt bridges: A:R.237, A:R.250

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Guiley, K.Z. et al., Structural mechanisms of DREAM complex assembly and regulation. Genes Dev. (2015)

Release Date

2015-05-13

Peptides

Retinoblastoma-like protein 1,Retinoblastoma-like protein 1: A
LIN52 peptide: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
X

Retinoblastoma-like protein 1,Retinoblastoma-like protein 1

LIN52 peptide

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