SMTL ID : 4ysi.1

Structure of USP7 with a novel viral protein

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.02 Å

Oligo State

monomer

Ligands

1 x SER- PRO- GLY- GLU- GLY- PRO- SER- GLY: SER-PRO-GLY-GLU-GLY-PRO-SER-GLY(Non-covalent)

SER-PRO-GLY-GLU-GLY-PRO-SER-GLY.1: 15 residues within 4Å: Chain A: M.38, M.40, R.42, F.56, R.90, I.92, E.100, D.102, W.103, G.104, F.105, S.106, N.107, F.108 Ligands: GOL.2 13 PLIP interactions: 13 interactions with chain A Hydrophobic interactions: A:F.105, A:F.105 Hydrogen bonds: A:R.42, A:R.42, A:D.102, A:D.102, A:W.103, A:G.104, A:G.104, A:S.106, A:N.107, A:N.107 Water bridges: A:S.106

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 8 residues within 4Å: Chain A: H.98, K.99, E.100, N.101, D.102 Ligands: SER-PRO-GLY-GLU-GLY-PRO-SER-GLY.1, SER-PRO-GLY-GLU-GLY-PRO-SER-GLY.1, SER-PRO-GLY-GLU-GLY-PRO-SER-GLY.1 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:K.99, A:N.101, A:D.102, A:D.102 Water bridges: A:E.100, A:D.102

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Chavoshi, S. et al., Structure of USP7 with a novel viral protein. J.Biol.Chem. (2016)

Release Date

2016-02-03

Peptides

Ubiquitin carboxyl-terminal hydrolase 7: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Ubiquitin carboxyl-terminal hydrolase 7

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