SMTL ID : 4z36.1

Crystal Structure of Human Lysophosphatidic Acid Receptor 1 in complex with ONO-3080573

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.90 Å

Oligo State

monomer

Ligands

1 x ON3: 1-(4-{[(2S,3R)-2-(2,3-dihydro-1H-inden-2-yloxy)-3-(3,5-dimethoxy-4-methylphenyl)-3-hydroxypropyl]oxy}phenyl)cyclopropanecarboxylic acid(Non-covalent)

ON3.1: 18 residues within 4Å: Chain A: V.70, M.124, T.127, Q.143, I.146, D.147, L.150, M.216, L.225, W.228, W.375, G.378, L.381, L.382, E.397, K.398, F.400, L.401 14 PLIP interactions: 14 interactions with chain A Hydrophobic interactions: A:V.70, A:L.150, A:W.375, A:L.381, A:L.382, A:L.382, A:E.397, A:F.400, A:L.401 Hydrogen bonds: A:T.127, A:Q.143, A:Q.143 Water bridges: A:K.57 Salt bridges: A:K.398

1 x 1WV: (2S)-2,3-dihydroxypropyl (7Z)-tetradec-7-enoate(Non-covalent)

1WV.2: 6 residues within 4Å: Chain A: F.115, L.140, L.141, T.148, G.197, S.201 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:F.115 Hydrogen bonds: A:T.148, A:G.197, A:S.201

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Chrencik, J.E. et al., Crystal Structure of Antagonist Bound Human Lysophosphatidic Acid Receptor 1. Cell (2015)

Release Date

2015-06-03

Peptides

Lysophosphatidic acid receptor 1,Soluble cytochrome b562: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Membrane

We predict this structure to be a membrane protein.
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Lysophosphatidic acid receptor 1,Soluble cytochrome b562