SMTL ID : 4z3l.5 (5 other biounits)

CRYSTAL STRUCTURE OF BIRCH POLLEN ALLERGEN BET V 1 MUTANT G26L, D69I, P90L, K97I

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

monomer

Ligands

5 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 1 residues within 4Å: Chain A: Q.36 No protein-ligand interaction detected (PLIP) SO4.2: 5 residues within 4Å: Chain A: G.46, N.47, G.48, G.49, P.50 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:N.47, A:N.47, A:G.49 SO4.3: 3 residues within 4Å: Chain A: A.157, Y.158, N.159 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:Y.158, A:N.159 SO4.4: 6 residues within 4Å: Chain A: F.64, G.88, G.89, L.90, I.98, Q.132 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:L.90, A:Q.132 SO4.5: 4 residues within 4Å: Chain A: I.44, E.45, I.53, K.68 3 PLIP interactions: 3 interactions with chain A Water bridges: A:E.45, A:E.45 Salt bridges: A:K.68

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Machado, Y. et al., Fold stability during endolysosomal acidification is a key factor for allergenicity and immunogenicity of the major birch pollen allergen. J.Allergy Clin.Immunol. (2016)

Release Date

2015-11-25

Peptides

Major pollen allergen Bet v 1-A: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
F

Major pollen allergen Bet v 1-A

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