SMTL ID : 4z4j.1

Crystal Structure of cellobiose 2-epimerase from Caldicellulosiruptor saccharolyticus DSM 8903

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.54 Å

Oligo State

monomer

Ligands

2 x IPA: ISOPROPYL ALCOHOL(Non-functional Binders)

IPA.1: 2 residues within 4Å: Chain A: K.38, D.40 2 PLIP interactions: 2 interactions with chain A Water bridges: A:D.40, A:Y.46 IPA.2: 1 residues within 4Å: Chain A: K.275 No protein-ligand interaction detected (PLIP)

4 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.3: 7 residues within 4Å: Chain A: G.62, C.63, I.64, W.110, V.127, Q.383, W.384 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:C.63, A:I.64, A:Q.383 Water bridges: A:L.65 EDO.4: 6 residues within 4Å: Chain A: R.68, Y.126, W.319, W.320, W.384, H.389 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:R.68, A:R.68, A:Y.126, A:W.384 EDO.5: 6 residues within 4Å: Chain A: A.75, V.79, E.137, E.140, R.210, K.399 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:E.140 Water bridges: A:N.207, A:R.210, A:K.399, A:K.399, A:K.399 EDO.6: 3 residues within 4Å: Chain A: Y.218, E.219, E.222 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Y.218 Water bridges: A:E.222, A:R.226

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Shen, Q.Y. et al., Crystal Structure of cellobiose 2-epimerase from Caldicellulosiruptor saccharolyticus DSM 8903. to be published

Release Date

2016-04-13

Peptides

Cellobiose 2-epimerase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Cellobiose 2-epimerase