SMTL ID : 4z55.1

Anaplastic lymphoma kinase catalytic domain complexed with pyrazolopyrimidine derivative of LDK378

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.55 Å

Oligo State

monomer

Ligands

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 6 residues within 4Å: Chain A: H.173, F.174, I.175, R.177, A.203, Y.207 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:H.173, A:I.175, A:R.177, A:R.177 GOL.2: 6 residues within 4Å: Chain A: I.100, S.101, F.103, N.104, R.110, C.111 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:R.110, A:C.111 Water bridges: A:I.100, A:F.103, A:H.105

1 x 4LO: N~6~-[5-methyl-4-(1-methylpiperidin-4-yl)-2-(propan-2-yloxy)phenyl]-N~4~-[2-(propan-2-ylsulfonyl)phenyl]-2H-pyrazolo[3,4-d]pyrimidine-4,6-diamine(Non-covalent)

4LO.3: 19 residues within 4Å: Chain A: L.51, H.53, G.54, V.59, E.61, A.77, K.79, L.125, E.126, L.127, M.128, A.129, G.131, D.132, S.135, R.182, L.185, G.198, D.199 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:V.59, A:V.59, A:A.77, A:L.127, A:L.185, A:L.185 Hydrogen bonds: A:M.128, A:M.128 Salt bridges: A:E.139

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Michellys, P.Y. et al., Design and synthesis of novel selective anaplastic lymphoma kinase inhibitors. Bioorg.Med.Chem.Lett. (2016)

Release Date

2016-02-03

Peptides

ALK tyrosine kinase receptor: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

ALK tyrosine kinase receptor