SMTL ID : 4z9m.5 (7 other biounits)

Crystal structure of human sarcomeric mitochondrial creatine kinase

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

monomer

Ligands

1 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)

ADP.1: 18 residues within 4Å: Chain A: S.138, R.140, R.142, H.201, W.238, R.246, M.250, R.302, G.304, V.305, H.306, R.330, T.332, G.333, G.334, V.335, D.345 Ligands: UNX.3 21 PLIP interactions: 21 interactions with chain A Hydrogen bonds: A:S.138, A:S.138, A:R.140, A:H.201, A:R.246, A:R.302, A:G.333, A:V.335 Water bridges: A:R.140, A:R.140, A:R.140, A:R.302, A:G.334 Salt bridges: A:R.140, A:R.142, A:R.302, A:R.302, A:R.330, A:R.330 pi-Stacking: A:H.306 pi-Cation interactions: A:R.140

15 x UNX: UNKNOWN ATOM OR ION(Non-functional Binders)

UNX.2: 3 residues within 4Å: Chain A: T.81, V.82, G.83 No protein-ligand interaction detected (PLIP) UNX.3: 3 residues within 4Å: Chain A: R.330, V.335 Ligands: ADP.1 No protein-ligand interaction detected (PLIP) UNX.4: 2 residues within 4Å: Chain A: R.162, D.223 No protein-ligand interaction detected (PLIP) UNX.5: 3 residues within 4Å: Chain A: E.261, R.262, R.265 No protein-ligand interaction detected (PLIP) UNX.6: 5 residues within 4Å: Chain A: G.181, R.182, H.229, N.230, Y.231 No protein-ligand interaction detected (PLIP) UNX.7: 3 residues within 4Å: Chain A: W.283, N.284, E.285 No protein-ligand interaction detected (PLIP) UNX.8: 3 residues within 4Å: Chain A: R.265, K.268, E.269 No protein-ligand interaction detected (PLIP) UNX.9: 3 residues within 4Å: Chain A: Q.275, E.280, F.281 No protein-ligand interaction detected (PLIP) UNX.10: 7 residues within 4Å: Chain A: N.38, T.69, G.70, N.73, T.81, G.83, L.211 No protein-ligand interaction detected (PLIP) UNX.11: 3 residues within 4Å: Chain A: I.79, K.80, Q.328 No protein-ligand interaction detected (PLIP) UNX.12: 4 residues within 4Å: Chain A: F.24, P.26, R.53, N.54 No protein-ligand interaction detected (PLIP) UNX.13: 4 residues within 4Å: Chain A: Y.30, L.33, A.41, L.44 No protein-ligand interaction detected (PLIP) UNX.14: 6 residues within 4Å: Chain A: K.185, L.186, S.187, P.222, A.224, R.225 No protein-ligand interaction detected (PLIP) UNX.15: 3 residues within 4Å: Chain A: D.64, Q.65, Q.68 No protein-ligand interaction detected (PLIP) UNX.16: 3 residues within 4Å: Chain A: E.89, N.284, I.290 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Rabeh, W.M. et al., Crystal structure of human sarcomeric mitochondrial creatine kinase. To Be Published

Release Date

2015-04-22

Peptides

Creatine kinase S-type, mitochondrial: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
E

Creatine kinase S-type, mitochondrial

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