SMTL ID : 4zel.1

Human dopamine beta-hydroxylase

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.90 Å

Oligo State

homo-dimer

Ligands

1 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-NAG.1: 7 residues within 4Å: Chain A: V.331, L.463, H.525, N.527, A.531, V.532, R.533 No protein-ligand interaction detected (PLIP)

2 x NAG- NAG- BMA: beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose

NAG-NAG-BMA.2: 3 residues within 4Å: Chain A: F.138, N.145, S.147 No protein-ligand interaction detected (PLIP) NAG-NAG-BMA.4: 8 residues within 4Å: Chain B: V.331, L.463, H.525, N.527, S.530, A.531, V.532, R.533 No protein-ligand interaction detected (PLIP)

1 x NAG- NAG- BMA- MAN: alpha-D-mannopyranose-(1-6)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose

NAG-NAG-BMA-MAN.3: 4 residues within 4Å: Chain B: N.181, I.182, Q.183, N.305 No protein-ligand interaction detected (PLIP)

1 x CU: COPPER (II) ION(Non-covalent)

CU.5: 3 residues within 4Å: Chain A: H.373, H.375, M.448 3 PLIP interactions: 1 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:H.373, H2O.1, H2O.1

2 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.6: 3 residues within 4Å: Chain A: L.8, N.25, V.26 No protein-ligand interaction detected (PLIP) NAG.7: 3 residues within 4Å: Chain B: N.25, V.26, H.34 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Vendelboe, T.V. et al., The crystal structure of human dopamine beta-hydroxylase at 2.9 angstrom resolution. Sci Adv (2016)

Release Date

2016-04-20

Peptides

Dopamine beta-hydroxylase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Dopamine beta-hydroxylase