SMTL ID : 4zg4.1 (1 other biounit)

Myosin Vc Pre-powerstroke

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.36 Å

Oligo State

monomer

Ligands

1 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 4 residues within 4Å: Chain A: T.168, S.216 Ligands: VO4.2, ADP.3 4 PLIP interactions: 2 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:T.168, A:S.216, H2O.1, H2O.5

1 x VO4: VANADATE ION(Non-covalent)

VO4.2: 11 residues within 4Å: Chain A: S.163, G.164, K.167, N.212, S.215, S.216, R.217, Y.437, G.438 Ligands: MG.1, ADP.3 14 PLIP interactions: 14 interactions with chain A Hydrogen bonds: A:S.163, A:G.164, A:K.167, A:N.212, A:S.215, A:S.215, A:S.216, A:S.216, A:R.217, A:G.438 Water bridges: A:S.163, A:N.206, A:S.216, A:G.438

1 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)

ADP.3: 22 residues within 4Å: Chain A: I.97, Y.98, N.109, P.110, Y.111, K.112, Q.113, L.114, Y.117, E.162, S.163, G.164, A.165, G.166, K.167, T.168, V.169, Y.173, N.212, N.214 Ligands: MG.1, VO4.2 19 PLIP interactions: 19 interactions with chain A Hydrogen bonds: A:N.109, A:K.112, A:Y.117, A:G.164, A:A.165, A:G.166, A:K.167, A:T.168, A:V.169, A:N.212 Water bridges: A:Y.98, A:Q.113, A:T.168, A:Y.173, A:N.212, A:N.214, A:S.216, A:S.216 Salt bridges: A:K.167

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.4: 5 residues within 4Å: Chain A: K.276, H.332, S.353, H.354, V.357 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:S.353, A:S.353 Water bridges: A:K.276

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wulf, S.F. et al., Force-producing ADP state of myosin bound to actin. Proc.Natl.Acad.Sci.USA (2016)

Release Date

2016-03-23

Peptides

myosin-Vc: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

myosin-Vc

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