SMTL ID : 4zh6.1

Crystal Structure of the Domain-Swapped Dimer Y60L mutant of Human Cellular Retinol Binding Protein II

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.55 Å

Oligo State

homo-dimer

Ligands

4 x ACT: ACETATE ION(Non-functional Binders)

ACT.1: 6 residues within 4Å: Chain A: E.72, T.74, Q.97, W.106, L.119 Chain B: Y.19 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:L.119 Hydrogen bonds: A:Q.97 Water bridges: A:E.72, A:E.72 ACT.2: 4 residues within 4Å: Chain A: W.106, Q.108, L.117 Chain B: K.40 4 PLIP interactions: 3 interactions with chain A, 1 interactions with chain B Hydrophobic interactions: A:W.106, A:L.117 Hydrogen bonds: A:Q.108 Salt bridges: B:K.40 ACT.3: 6 residues within 4Å: Chain A: Y.19 Chain B: E.72, T.74, Q.97, W.106, L.119 3 PLIP interactions: 1 interactions with chain A, 2 interactions with chain B Water bridges: A:Y.19 Hydrophobic interactions: B:L.119 Hydrogen bonds: B:Q.97 ACT.4: 4 residues within 4Å: Chain A: K.40 Chain B: W.106, Q.108, L.117 4 PLIP interactions: 3 interactions with chain B, 1 interactions with chain A Hydrophobic interactions: B:W.106, B:L.117 Hydrogen bonds: B:Q.108 Salt bridges: A:K.40

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Assar, Z. et al., Domain-Swapped Dimers of Intracellular Lipid-Binding Proteins: Evidence for Ordered Folding Intermediates. Structure (2016)

Release Date

2016-06-08

Peptides

Retinol-binding protein 2: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Retinol-binding protein 2

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