SMTL ID : 4zld.1

Crystal structure of human Roquin-2 ROQ domain in complex with Roquin CDE RNA

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.60 Å

Oligo State

monomer

Ligands

4 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 6 residues within 4Å: Chain A: R.15, Q.20, F.21, L.22, Q.63 Chain B: U.1 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:R.15, A:Q.20, A:Q.63 GOL.2: 3 residues within 4Å: Chain A: P.127, Q.145, D.149 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:Q.145 GOL.3: 8 residues within 4Å: Chain A: L.76, Y.77, S.80, C.81, F.82, V.84, K.97 Chain B: U.10 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:L.76, A:S.80, A:F.82, A:K.97 Water bridges: A:V.84 GOL.4: 6 residues within 4Å: Chain A: A.79, E.109, A.112, Q.113, H.116, L.151 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:A.112

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Sakurai, S. et al., Structure of human Roquin-2 and its complex with constitutive-decay element RNA. Acta Crystallogr.,Sect.F (2015)

Release Date

2015-08-19

Peptides

Roquin-2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Roquin-2

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