- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.60 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x CEZ: 4-O-beta-D-glucopyranosyl-D-gluconic acid(Non-covalent)
- 4 x SO4: SULFATE ION(Non-functional Binders)
SO4.2: 7 residues within 4Å:- Chain A: R.341, Y.624, H.626, N.672, T.694, G.695
- Ligands: CEZ.1
9 PLIP interactions:9 interactions with chain A- Hydrogen bonds: A:Y.624, A:G.695
- Water bridges: A:R.341, A:R.341, A:H.626, A:N.693, A:T.696
- Salt bridges: A:R.341, A:H.626
SO4.3: 4 residues within 4Å:- Chain A: Q.12, N.104, S.106, H.117
10 PLIP interactions:10 interactions with chain A- Hydrogen bonds: A:N.104, A:S.106
- Water bridges: A:Q.12, A:Q.12, A:Q.12, A:Q.12, A:Q.12, A:N.104, A:H.117
- Salt bridges: A:H.117
SO4.11: 7 residues within 4Å:- Chain B: R.341, Y.624, H.626, N.672, T.694, G.695
- Ligands: CEZ.10
8 PLIP interactions:8 interactions with chain B- Hydrogen bonds: B:T.694, B:G.695
- Water bridges: B:R.341, B:R.341, B:R.341, B:N.693
- Salt bridges: B:R.341, B:H.626
SO4.12: 4 residues within 4Å:- Chain B: Q.12, N.104, S.106, H.117
11 PLIP interactions:11 interactions with chain B- Hydrogen bonds: B:N.104, B:S.106
- Water bridges: B:Q.12, B:Q.12, B:Q.12, B:Q.12, B:Q.12, B:N.104, B:H.117, B:H.117
- Salt bridges: B:H.117
- 10 x GOL: GLYCEROL(Non-functional Binders)
GOL.4: 5 residues within 4Å:- Chain A: Q.415, Y.424, D.501, V.502, P.715
7 PLIP interactions:7 interactions with chain A- Hydrogen bonds: A:Q.415, A:Q.415
- Water bridges: A:Q.415, A:Y.424, A:Y.424, A:D.501, A:D.501
GOL.5: 7 residues within 4Å:- Chain A: G.1, L.2, L.13, S.15, A.18, E.657, L.660
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:E.657
- Water bridges: A:L.2
GOL.6: 8 residues within 4Å:- Chain A: T.343, D.345, P.346, Q.347, K.396, Y.397, I.398, N.399
6 PLIP interactions:6 interactions with chain A- Hydrogen bonds: A:Q.347, A:Q.347, A:N.399
- Water bridges: A:T.343, A:T.343, A:I.398
GOL.7: 5 residues within 4Å:- Chain A: K.62, T.63, M.65, Q.66
- Chain B: W.167
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:K.62, A:T.63, A:M.65, A:Q.66
GOL.8: 7 residues within 4Å:- Chain A: K.111, K.309, N.326, H.327, W.328, P.330, R.331
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:K.111, A:R.331
- Water bridges: A:K.111
GOL.13: 5 residues within 4Å:- Chain B: Q.415, Y.424, D.501, V.502, P.715
8 PLIP interactions:8 interactions with chain B- Hydrogen bonds: B:Q.415, B:Q.415, B:Y.424
- Water bridges: B:Q.415, B:D.419, B:D.419, B:D.501, B:D.501
GOL.14: 7 residues within 4Å:- Chain B: G.1, L.2, L.13, S.15, A.18, E.657, L.660
2 PLIP interactions:2 interactions with chain B- Hydrogen bonds: B:E.657
- Water bridges: B:L.2
GOL.15: 8 residues within 4Å:- Chain B: T.343, D.345, P.346, Q.347, K.396, Y.397, I.398, N.399
7 PLIP interactions:7 interactions with chain B- Hydrogen bonds: B:T.343, B:Q.347, B:Q.347, B:N.399
- Water bridges: B:T.343, B:N.350, B:I.398
GOL.16: 5 residues within 4Å:- Chain A: W.167
- Chain B: K.62, T.63, M.65, Q.66
3 PLIP interactions:3 interactions with chain B- Hydrogen bonds: B:K.62, B:M.65, B:Q.66
GOL.17: 7 residues within 4Å:- Chain B: K.111, K.309, N.326, H.327, W.328, P.330, R.331
3 PLIP interactions:3 interactions with chain B- Hydrogen bonds: B:K.111, B:R.331
- Water bridges: B:K.111
- 2 x CL: CHLORIDE ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Nam, Y.W. et al., Crystal Structure and Substrate Recognition of Cellobionic Acid Phosphorylase, Which Plays a Key Role in Oxidative Cellulose Degradation by Microbes. J.Biol.Chem. (2015)
- Release Date
- 2015-06-10
- Peptides
- Putative b-glycan phosphorylase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.60 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x CEZ: 4-O-beta-D-glucopyranosyl-D-gluconic acid(Non-covalent)
- 4 x SO4: SULFATE ION(Non-functional Binders)
- 10 x GOL: GLYCEROL(Non-functional Binders)
- 2 x CL: CHLORIDE ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Nam, Y.W. et al., Crystal Structure and Substrate Recognition of Cellobionic Acid Phosphorylase, Which Plays a Key Role in Oxidative Cellulose Degradation by Microbes. J.Biol.Chem. (2015)
- Release Date
- 2015-06-10
- Peptides
- Putative b-glycan phosphorylase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A