- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.60 Å
- Oligo State
- homo-dimer
- Ligands
- 8 x CA: CALCIUM ION(Non-covalent)
CA.1: 4 residues within 4Å:- Chain A: E.11, D.67, E.69, D.103
6 PLIP interactions:4 interactions with chain A, 2 Ligand-Water interactions- Metal complexes: A:E.11, A:D.67, A:E.69, A:D.103, H2O.1, H2O.1
CA.2: 6 residues within 4Å:- Chain A: N.102, H.104, D.134, D.136, N.143, D.195
5 PLIP interactions:5 interactions with chain A- Metal complexes: A:H.104, A:D.134, A:D.136, A:N.143, A:D.195
CA.3: 6 residues within 4Å:- Chain A: E.11, E.69, D.100, Q.101, D.103, D.136
5 PLIP interactions:5 interactions with chain A- Metal complexes: A:E.11, A:D.100, A:Q.101, A:D.103, A:D.136
CA.4: 1 residues within 4Å:- Chain A: D.199
3 PLIP interactions:1 interactions with chain A, 2 Ligand-Water interactions- Metal complexes: A:D.199, H2O.2, H2O.2
CA.6: 4 residues within 4Å:- Chain B: E.11, D.67, E.69, D.103
6 PLIP interactions:4 interactions with chain B, 2 Ligand-Water interactions- Metal complexes: B:E.11, B:D.67, B:E.69, B:D.103, H2O.2, H2O.2
CA.7: 6 residues within 4Å:- Chain B: N.102, H.104, D.134, D.136, N.143, D.195
5 PLIP interactions:5 interactions with chain B- Metal complexes: B:H.104, B:D.134, B:D.136, B:N.143, B:D.195
CA.8: 6 residues within 4Å:- Chain B: E.11, E.69, D.100, Q.101, D.103, D.136
5 PLIP interactions:5 interactions with chain B- Metal complexes: B:E.11, B:D.100, B:Q.101, B:D.103, B:D.136
CA.9: 1 residues within 4Å:- Chain B: D.199
3 PLIP interactions:1 interactions with chain B, 2 Ligand-Water interactions- Metal complexes: B:D.199, H2O.3, H2O.3
- 2 x GOL: GLYCEROL(Non-functional Binders)
GOL.5: 3 residues within 4Å:- Chain A: Q.192, G.198, T.202
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:G.198
- Water bridges: A:R.167
GOL.10: 3 residues within 4Å:- Chain B: Q.192, G.198, T.202
3 PLIP interactions:3 interactions with chain B- Hydrogen bonds: B:G.198
- Water bridges: B:R.167, B:T.194
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Kudo, S. et al., Adhesive Dimerization of Human P-Cadherin Catalyzed by a Chaperone-like Mechanism. Structure (2016)
- Release Date
- 2016-09-07
- Peptides
- Cadherin-3: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.60 Å
- Oligo State
- homo-dimer
- Ligands
- 8 x CA: CALCIUM ION(Non-covalent)
- 2 x GOL: GLYCEROL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Kudo, S. et al., Adhesive Dimerization of Human P-Cadherin Catalyzed by a Chaperone-like Mechanism. Structure (2016)
- Release Date
- 2016-09-07
- Peptides
- Cadherin-3: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A