SMTL ID : 4zmz.1

Crystal structure of human P-cadherin (monomer 2)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.05 Å

Oligo State

monomer

Ligands

4 x CA: CALCIUM ION(Non-covalent)

CA.1: 6 residues within 4Å: Chain A: E.12, E.70, D.101, Q.102, D.104, D.137 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:E.12, A:E.70, A:D.101, A:Q.102, A:D.137 CA.2: 6 residues within 4Å: Chain A: N.103, H.105, D.135, D.137, N.144, D.196 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:H.105, A:D.135, A:D.137, A:N.144, A:D.196 CA.3: 4 residues within 4Å: Chain A: E.12, D.68, E.70, D.104 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:E.12, A:D.68, A:E.70, A:D.104, H2O.1 CA.4: 2 residues within 4Å: Chain A: D.200, G.201 3 PLIP interactions: 2 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.200, A:G.201, H2O.1

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kudo, S. et al., Adhesive Dimerization of Human P-Cadherin Catalyzed by a Chaperone-like Mechanism. Structure (2016)

Release Date

2016-09-07

Peptides

Cadherin-3: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Cadherin-3

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