SMTL ID : 4znj.1

Thermus Phage P74-26 Large Terminase ATPase domain mutant R139A (I 2 3 space group)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.53 Å

Oligo State

monomer

Ligands

6 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 5 residues within 4Å: Chain A: Q.45, S.46, G.47, K.48, S.49 11 PLIP interactions: 11 interactions with chain A Hydrogen bonds: A:Q.45, A:S.46, A:G.47, A:K.48, A:S.49 Water bridges: A:G.43, A:S.46, A:K.48, A:K.48, A:R.84 Salt bridges: A:K.48 SO4.2: 4 residues within 4Å: Chain A: Q.104, R.105, R.106, R.107 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:R.106, A:R.107 Salt bridges: A:R.106, A:R.107 SO4.3: 4 residues within 4Å: Chain A: R.200, T.215, H.216, P.217 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:T.215 Salt bridges: A:R.200 SO4.4: 3 residues within 4Å: Chain A: R.44, R.240, Y.253 2 PLIP interactions: 2 interactions with chain A Salt bridges: A:R.44, A:R.240 SO4.5: 2 residues within 4Å: Chain A: R.107, R.133 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.107 Salt bridges: A:R.133 SO4.6: 3 residues within 4Å: Chain A: R.117, G.123, K.125 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:G.123 Salt bridges: A:R.117, A:K.125

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hilbert, B.J. et al., Structure and mechanism of the ATPase that powers viral genome packaging. Proc.Natl.Acad.Sci.USA (2015)

Release Date

2015-07-08

Peptides

Phage terminase large subunit: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Phage terminase large subunit