SMTL ID : 4zpf.1

BACE1 in complex with 8-(3-((1-aminopropan-2-yl)oxy)benzyl)-4-(cyclohexylamino)-1-(3-fluorophenyl)-1,3,8-triazaspiro[4.5]dec-3-en-2-one

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

monomer

Ligands

1 x 4QD: 8-(3-{[(2S)-1-aminopropan-2-yl]oxy}benzyl)-4-(cyclohexylamino)-1-(3-fluorophenyl)-1,3,8-triazaspiro[4.5]dec-3-en-2-one(Non-covalent)

4QD.1: 21 residues within 4Å: Chain A: G.31, Q.32, G.33, L.50, D.52, Y.91, T.92, Q.93, G.94, K.127, F.128, I.130, W.135, Y.218, K.244, I.246, G.250, T.251, T.252, T.349, V.352 24 PLIP interactions: 24 interactions with chain A Hydrophobic interactions: A:L.50, A:Y.91, A:Y.91, A:Q.93, A:F.128, A:W.135, A:I.246, A:V.352 Hydrogen bonds: A:T.92, A:Q.93, A:T.252 Water bridges: A:G.31, A:T.92, A:Q.93, A:D.248, A:G.250, A:T.252, A:T.252, A:R.255, A:R.255, A:R.255 Salt bridges: A:D.52, A:D.248 pi-Stacking: A:Y.91

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Egbertson, M. et al., Methyl-substitution of an iminohydantoin spiropiperidine beta-secretase (BACE-1) inhibitor has a profound effect on its potency. Bioorg.Med.Chem.Lett. (2015)

Release Date

2015-08-05

Peptides

Beta-secretase 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Beta-secretase 1

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