SMTL ID : 4zre.1

Crystal structure of SMG1 F278D mutant

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

monomer

Ligands

1 x NAG- NAG- BMA: beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose

NAG-NAG-BMA.1: 7 residues within 4Å: Chain A: N.234, D.260, D.261, Q.263, G.264, Q.270, G.272 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:Q.263 Water bridges: A:D.260, A:Q.270

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.2: 5 residues within 4Å: Chain A: E.58, G.59, Y.60, A.61, R.62 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Guo, S. et al., Structure of product-bound SMG1 lipase: active site gating implications. Febs J. (2015)

Release Date

2015-09-23

Peptides

LIP1, secretory lipase (Family 3): A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

LIP1, secretory lipase (Family 3)