SMTL ID : 4zs2.1

Structural complex of FTO/fluorescein

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.16 Å

Oligo State

monomer

Ligands

1 x AKG: 2-OXOGLUTARIC ACID(Non-covalent)

AKG.1: 14 residues within 4Å: Chain A: R.69, N.178, H.204, D.206, V.217, Y.268, H.280, V.282, R.289, S.291, T.293, R.295 Ligands: FLU.2, MN.3 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:V.282, A:T.293 Hydrogen bonds: A:Y.268, A:S.291 Water bridges: A:R.69, A:R.295 Salt bridges: A:R.69, A:H.204, A:R.289, A:R.295

1 x FLU: 2-(6-HYDROXY-3-OXO-3H-XANTHEN-9-YL)-BENZOIC ACID(Non-covalent)

FLU.2: 12 residues within 4Å: Chain A: V.56, I.58, L.64, P.66, R.69, Y.81, L.82, V.201, S.202, W.203, H.204 Ligands: AKG.1 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:V.56, A:I.58, A:L.82, A:H.204 Hydrogen bonds: A:R.69, A:R.69, A:S.202, A:W.203

1 x MN: MANGANESE (II) ION(Non-covalent)

MN.3: 4 residues within 4Å: Chain A: H.204, D.206, H.280 Ligands: AKG.1 4 PLIP interactions: 3 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:H.204, A:D.206, A:H.280, H2O.3

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wang, T. et al., Fluorescein Derivatives as Bifunctional Molecules for the Simultaneous Inhibiting and Labeling of FTO Protein. J.Am.Chem.Soc. (2015)

Release Date

2015-11-04

Peptides

Alpha-ketoglutarate-dependent dioxygenase FTO: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Alpha-ketoglutarate-dependent dioxygenase FTO

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