Toggle navigation
Modelling
myWorkspace
Alignment Mode
User Template Mode
DeepView Project Mode
Modelling API
Template Library
Repository
SWISS-MODEL Repository
Repository API
3D-Beacons API
Annotation Projects
TBvar3D
Tools
Structure Assessment
Structure Comparison
QMEAN
Documentation
SWISS-MODEL
Examples
Video Tutorial
New Features
SWISS-MODEL Repository
QMEAN
Structure Assessment
Structure Comparison
TBvar3D
Protein Structure Course
References
Log in
Create Account
SMTL ID : 4zsw.2
(1 other biounit)
Pig Brain GABA-AT inactivated by (E)-(1S,3S)-3-Amino-4-fluoromethylenyl-1-cyclopentanoic acid
Coordinates
PDB Format
Compare
Method
X-RAY DIFFRACTION 1.70 Å
Oligo State
homo-dimer
Ligands
1 x
FES
:
FE2/S2 (INORGANIC) CLUSTER
(Non-covalent)
FES.1:
6 residues within 4Å:
Chain A:
A.124
,
C.125
,
C.128
Chain B:
A.124
,
C.125
,
C.128
4
PLIP interactions
:
2 interactions with chain A
,
2 interactions with chain B
,
Metal complexes:
A:C.125
,
A:C.128
,
B:C.125
,
B:C.128
1 x
GOL
:
GLYCEROL
(Non-functional Binders)
GOL.2:
3 residues within 4Å:
Chain A:
D.268
,
R.272
,
H.305
3
PLIP interactions
:
3 interactions with chain A
Hydrogen bonds:
A:R.272
,
A:R.272
,
A:R.398
1 x
ACT
:
ACETATE ION
(Non-functional Binders)
ACT.3:
4 residues within 4Å:
Chain A:
K.193
,
H.196
,
E.260
Chain B:
Y.338
2
PLIP interactions
:
2 interactions with chain A
Salt bridges:
A:K.193
,
A:H.196
2 x
RW2
:
(1S)-4-[({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methyl)amino]cyclopent-3-ene-1,3-dicarboxylic acid
(Non-covalent)
RW2.4:
19 residues within 4Å:
Chain A:
I.62
,
C.125
,
G.126
,
S.127
,
N.130
,
F.179
,
H.180
,
G.181
,
R.182
,
E.255
,
E.260
,
D.288
,
V.290
,
Q.291
,
K.319
,
R.435
Chain B:
F.341
,
N.342
,
T.343
26
PLIP interactions
:
5 interactions with chain B
,
21 interactions with chain A
Hydrophobic interactions:
B:F.341
,
A:I.62
,
A:F.179
,
A:E.255
,
A:V.290
Hydrogen bonds:
B:T.343
,
A:G.126
,
A:S.127
,
A:N.130
,
A:Q.291
,
A:K.319
,
A:R.435
,
A:R.435
Water bridges:
B:N.342
,
B:N.342
,
B:W.344
,
A:S.127
,
A:S.127
,
A:S.127
,
A:F.179
,
A:R.182
,
A:E.255
,
A:S.318
,
A:S.318
Salt bridges:
A:R.182
pi-Stacking:
A:F.179
RW2.5:
19 residues within 4Å:
Chain A:
F.341
,
N.342
,
T.343
Chain B:
I.62
,
C.125
,
G.126
,
S.127
,
N.130
,
F.179
,
H.180
,
G.181
,
R.182
,
E.255
,
E.260
,
D.288
,
V.290
,
Q.291
,
K.319
,
R.435
26
PLIP interactions
:
22 interactions with chain B
,
4 interactions with chain A
Hydrophobic interactions:
B:I.62
,
B:F.179
,
B:E.255
,
B:V.290
Hydrogen bonds:
B:G.126
,
B:S.127
,
B:N.130
,
B:Q.291
,
B:K.319
,
B:R.435
,
B:R.435
,
A:T.343
Water bridges:
B:S.127
,
B:S.127
,
B:S.127
,
B:S.127
,
B:S.127
,
B:F.179
,
B:R.182
,
B:E.255
,
B:S.318
,
A:N.342
,
A:N.342
,
A:W.344
Salt bridges:
B:R.182
pi-Stacking:
B:F.179
Links
RCSB
PDBe
PDBe-KB
PDBj
PDBsum
CATH
PLIP
Citation
Lee, H. et al., Mechanism of Inactivation of GABA Aminotransferase by (E)- and (Z)-(1S,3S)-3-Amino-4-fluoromethylenyl-1-cyclopentanoic Acid. Acs Chem.Biol. (2015)
Release Date
2015-07-08
Peptides
4-aminobutyrate aminotransferase, mitochondrial:
A
B
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
C
B
D
Export Alignment
FASTA format
Clustal Format
PNG Image
Secondary Structure
None
DSSP
PSIPRED
SSpro
Colour Scheme
Fade Mismatches
Enhance Mismatches
Chain
Unique Chain
Rainbow
2° Structure
Bfactor
Bfactor Range
SOA
Entropy
Clustal
Hydrophobic
Size
Charged
Polar
Proline
Ser/Thr
Cysteine
Aliphatic
Aromatic
No Colour
Background
3D Viewer
NGL
PV
2D
FASTA
Multi FASTA
ClustalW
PNG
4-aminobutyrate aminotransferase, mitochondrial
Toggle Identical (AB)
Related Entries With Identical Sequence
4y0i.1
|
4y0i.2
|
4zsw.1
|
4zsy.1
|
4zsy.2
Cartoon
Cartoon
Tube
Trace
Lines
Ball+Stick
Licorice
Hyperball
Rope
Surface
Spacefill
Outline
Fog
Background
Transparent
Resolution
Low
Medium
High
Extreme