SMTL ID : 4zvi.1

GYRASE B IN COMPLEX WITH 4,5-DIBROMOPYRROLAMIDE-BASED INHIBITOR

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

monomer

Ligands

1 x 4S4: N-(4-{[(4,5-dibromo-1H-pyrrol-2-yl)carbonyl]amino}benzoyl)glycine(Non-covalent)

4S4.1: 11 residues within 4Å: Chain A: V.28, N.31, E.35, D.58, R.61, G.62, I.63, P.64, V.105, T.150, V.152 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:N.31, A:I.63 Hydrogen bonds: A:D.58, A:T.150

2 x IOD: IODIDE ION(Non-functional Binders)

IOD.2: 4 residues within 4Å: Chain A: N.256, I.258, P.315, F.317 Ligand excluded by PLIP IOD.3: 2 residues within 4Å: Chain A: G.9, M.10 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zidar, N. et al., N-Phenyl-4,5-dibromopyrrolamides and N-Phenylindolamides as ATP Competitive DNA Gyrase B Inhibitors: Design, Synthesis, and Evaluation. J.Med.Chem. (2015)

Release Date

2015-07-15

Peptides

DNA gyrase subunit B: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

DNA gyrase subunit B