- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.87 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x ZN: ZINC ION(Non-covalent)
- 2 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)
FAD.2: 28 residues within 4Å:- Chain A: H.11, K.15, S.16, F.17, N.18, S.20, P.102, L.103, Y.104, W.105, F.106, T.147, T.148, G.149, G.150, Y.155, P.192, E.193, E.197, R.200, K.201, V.204
- Chain B: V.64, N.66, Y.67, G.68, D.117
- Ligands: ET.4
26 PLIP interactions:24 interactions with chain A, 2 interactions with chain B- Hydrophobic interactions: A:Y.104, A:Y.104, B:Y.67
- Hydrogen bonds: A:F.17, A:N.18, A:N.18, A:S.20, A:S.20, A:L.103, A:L.103, A:W.105, A:F.106, A:T.147, A:T.147, A:G.149, A:G.150, A:Y.155, A:Y.155, A:R.200, B:N.66
- Water bridges: A:H.11, A:H.11, A:N.161
- Salt bridges: A:H.11
- pi-Stacking: A:F.17, A:W.105
FAD.6: 27 residues within 4Å:- Chain A: N.66, Y.67, G.68, D.117
- Chain B: H.11, K.15, S.16, F.17, N.18, S.20, P.102, L.103, Y.104, W.105, F.106, T.147, T.148, G.149, G.150, Y.155, P.192, E.193, E.197, R.200, K.201, V.204
- Ligands: ET.3
27 PLIP interactions:26 interactions with chain B, 1 interactions with chain A- Hydrophobic interactions: B:Y.104, B:Y.104, B:Y.104
- Hydrogen bonds: B:F.17, B:N.18, B:N.18, B:S.20, B:S.20, B:L.103, B:L.103, B:W.105, B:F.106, B:T.147, B:T.147, B:G.149, B:G.150, B:Y.155, B:Y.155, B:R.200, A:N.66
- Water bridges: B:N.161, B:K.201
- Salt bridges: B:H.11
- pi-Stacking: B:F.17, B:W.105, B:W.105, B:W.105
- 3 x ET: ETHIDIUM(Non-covalent)
ET.3: 19 residues within 4Å:- Chain A: N.66, Y.67, G.68, V.69, T.71, H.72, L.120, C.121, Q.122, F.126, I.128, F.178
- Chain B: W.105, G.149, G.150, E.193, I.194
- Ligands: FAD.6, ET.7
12 PLIP interactions:7 interactions with chain A, 5 interactions with chain B- Hydrophobic interactions: A:Q.122, A:F.126, A:F.126, A:F.178, B:W.105, B:W.105, B:W.105
- Hydrogen bonds: A:G.68, A:T.71, A:Q.122
- Water bridges: B:Y.155, B:N.161
ET.4: 18 residues within 4Å:- Chain A: W.105, G.149, G.150, E.193, I.194
- Chain B: N.66, Y.67, G.68, V.69, T.71, H.72, L.120, C.121, Q.122, F.126, I.128, F.178
- Ligands: FAD.2
11 PLIP interactions:4 interactions with chain A, 7 interactions with chain B- Hydrophobic interactions: A:W.105, A:W.105, A:W.105, B:Q.122, B:F.126, B:F.126, B:F.178
- Water bridges: A:N.161
- Hydrogen bonds: B:G.68, B:T.71, B:Q.122
ET.7: 9 residues within 4Å:- Chain A: I.128, F.131, F.178
- Chain B: G.149, G.150, T.151, M.154, I.194
- Ligands: ET.3
4 PLIP interactions:2 interactions with chain A, 2 interactions with chain B- Hydrophobic interactions: A:I.128, A:F.131, B:I.194, B:I.194
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Leung, K.K. et al., Binding of DNA-Intercalating Agents to Oxidized and Reduced Quinone Reductase 2. Biochemistry (2015)
- Release Date
- 2016-03-30
- Peptides
- Ribosyldihydronicotinamide dehydrogenase [quinone]: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.87 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x ZN: ZINC ION(Non-covalent)
- 2 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)
- 3 x ET: ETHIDIUM(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Leung, K.K. et al., Binding of DNA-Intercalating Agents to Oxidized and Reduced Quinone Reductase 2. Biochemistry (2015)
- Release Date
- 2016-03-30
- Peptides
- Ribosyldihydronicotinamide dehydrogenase [quinone]: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B