SMTL ID : 4zvo.1

Caspase-7 Variant 4 (V4) with reprogrammed substrate specificity due to Y230V/W232Y/S234V/Q276D substitutions bound to VEID inhibitor.

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.85 Å

Oligo State

hetero-2-2-mer

Ligands

2 x ACE- VAL- GLU- ILE- ASJ: Peptide ACE-VAL-GLU-ILE-ASJ(Non-covalent)

ACE-VAL-GLU-ILE-ASJ.1: 15 residues within 4Å: Chain A: V.86, R.87, S.143, H.144, G.145, Q.184, A.185, C.186 Chain B: V.32, S.33, Y.34, R.35, P.37, D.81, F.84 15 PLIP interactions: 11 interactions with chain B, 4 interactions with chain A Hydrophobic interactions: B:V.32, B:Y.34, B:Y.34, B:F.84 Hydrogen bonds: B:S.33, B:R.35, B:R.35, B:R.35, B:D.81, A:H.144, A:Q.184, A:C.186 Salt bridges: B:R.35, B:R.35, A:R.87 ACE-VAL-GLU-ILE-ASJ.2: 16 residues within 4Å: Chain C: V.86, R.87, S.143, H.144, G.145, Q.184, A.185, C.186 Chain D: V.32, S.33, Y.34, R.35, V.36, P.37, D.81, F.84 18 PLIP interactions: 5 interactions with chain C, 13 interactions with chain D Hydrogen bonds: C:G.145, C:Q.184, C:C.186, D:S.33, D:R.35, D:R.35, D:R.35, D:D.81 Salt bridges: C:R.87, C:H.144, D:R.35, D:R.35 Hydrophobic interactions: D:V.32, D:V.32, D:Y.34, D:Y.34, D:V.36, D:P.37

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hill, M.E. et al., Reprogramming Caspase-7 Specificity by Regio-Specific Mutations and Selection Provides Alternate Solutions for Substrate Recognition. Acs Chem.Biol. (2016)

Release Date

2016-04-20

Peptides

Caspase-7: AC
Caspase-7: BD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

C
C

B
B

D
D

Caspase-7

Caspase-7

Related Entries With Identical Sequence