SMTL ID : 4zxh.1

Crystal Structure of holo-AB3403 a four domain nonribosomal peptide synthetase from Acinetobacter Baumanii

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.70 Å

Oligo State

monomer

Ligands

1 x PNS: 4'-PHOSPHOPANTETHEINE(Covalent)

PNS.1: 17 residues within 4Å: Chain A: G.25, I.26, I.29, Y.39, P.281, T.300, F.335, S.336, V.339, R.346, N.351, P.352, F.359, Q.400, L.401, H.1007, S.1008 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:I.29, A:F.335, A:V.339 Hydrogen bonds: A:T.300, A:N.351, A:S.1008 Salt bridges: A:R.346

1 x PX4: 1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSPHOCHOLINE(Non-covalent)

PX4.2: 12 residues within 4Å: Chain A: H.2, P.57, I.58, L.61, I.94, W.127, Y.139, I.141, F.143, L.159, V.162, F.166 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:P.57, A:P.57, A:L.61, A:I.94, A:W.127, A:W.127, A:L.159, A:F.166, A:F.166 Hydrogen bonds: A:Y.139

1 x K: POTASSIUM ION(Non-covalent)

K.3: 5 residues within 4Å: Chain A: E.371, L.372, L.374, I.376, S.391 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:E.371, A:L.372, A:L.374, A:I.376, A:S.391

1 x NI: NICKEL (II) ION(Non-covalent)

NI.4: 2 residues within 4Å: Chain A: G.1, H.2 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:H.2

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Drake, E.J. et al., Structures of two distinct conformations of holo-non-ribosomal peptide synthetases. Nature (2016)

Release Date

2015-12-30

Peptides

ABBFA_003403: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

ABBFA_003403

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