SMTL ID : 4zxp.3 (2 other biounits)

Crystal structure of Peptidyl- tRNA Hydrolase from Vibrio cholerae

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.63 Å

Oligo State

homo-dimer

Ligands

1 x FLC: CITRATE ANION(Non-covalent)

FLC.1: 14 residues within 4Å: Chain A: N.16, H.26, F.72, M.73, N.74, N.120, L.156 Chain B: N.16, H.26, F.72, M.73, N.74, N.120, L.156 11 PLIP interactions: 5 interactions with chain B, 6 interactions with chain A Hydrogen bonds: B:N.16, B:M.73, B:N.120, A:N.16, A:N.16, A:M.73, A:N.120 Water bridges: B:N.120, A:N.120 Salt bridges: B:H.26, A:H.26

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kabra, A. et al., Unraveling the stereochemical and dynamic aspects of the catalytic site of bacterial peptidyl-tRNA hydrolase. RNA (2017)

Release Date

2016-06-22

Peptides

Peptidyl-tRNA hydrolase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Peptidyl-tRNA hydrolase

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