SMTL ID : 4zye.1

Crystal structure of Sulfolobus solfataricus O6-methylguanine methyltransferase

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.85 Å

Oligo State

monomer

Ligands

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 4 residues within 4Å: Chain A: G.25, Y.26, C.42, D.43 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:Y.26, A:D.43 GOL.2: 8 residues within 4Å: Chain A: K.31, F.36, S.54, F.55, T.56, E.57, F.58, E.75 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:K.31, A:S.54, A:E.57, A:F.58

3 x NO3: NITRATE ION(Non-functional Binders)

NO3.3: 2 residues within 4Å: Chain A: Y.82, R.85 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:R.85, A:R.85 Water bridges: A:T.81, A:Y.82 NO3.4: 2 residues within 4Å: Chain A: V.45, R.50 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:R.50 Water bridges: A:D.43, A:G.47 NO3.5: 7 residues within 4Å: Chain A: T.102, Y.103, K.104, P.114, I.136, A.137, E.138 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:Y.103, A:K.104, A:I.136, A:E.138 Water bridges: A:N.139

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Perugino, G. et al., Structure-function relationships governing activity and stability of a DNA alkylation damage repair thermostable protein. Nucleic Acids Res. (2015)

Release Date

2015-08-12

Peptides

Methylated-DNA--protein-cysteine methyltransferase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Methylated-DNA--protein-cysteine methyltransferase