SMTL ID : 4zyk.1 (1 other biounit)

Crystal Structure of Quaternary-Specific RSV-Neutralizing Human Antibody AM14

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

hetero-1-1-mer

Ligands

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 3 residues within 4Å: Chain A: K.65, G.66 Ligands: EDO.2 4 PLIP interactions: 4 interactions with chain A Water bridges: A:K.65, A:G.66, A:G.66 Salt bridges: A:K.65 SO4.5: 2 residues within 4Å: Chain B: S.157, G.158 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:G.158 Water bridges: B:N.159, B:S.160, B:S.160

3 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 3 residues within 4Å: Chain A: K.65, G.66 Ligands: SO4.1 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:K.65 EDO.3: 6 residues within 4Å: Chain A: L.151, V.179, S.187, L.188, S.189 Chain B: T.179 7 PLIP interactions: 3 interactions with chain B, 4 interactions with chain A Water bridges: B:S.177, B:T.179, B:T.179, A:S.187, A:S.189, A:S.189 Hydrogen bonds: A:S.189 EDO.4: 2 residues within 4Å: Chain A: R.16, S.17 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:S.17 Water bridges: A:G.15, A:R.16

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Gilman, M.S. et al., Characterization of a Prefusion-Specific Antibody That Recognizes a Quaternary, Cleavage-Dependent Epitope on the RSV Fusion Glycoprotein. Plos Pathog. (2015)

Release Date

2015-07-29

Peptides

AM14 Fab heavy chain: A
AM14 light chain: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
H

B
L

AM14 Fab heavy chain

AM14 light chain

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