SMTL ID : 5a0f.1

Crystal structure of Yersinia Afp18-modified RhoA

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

monomer

Ligands

1 x GDP: GUANOSINE-5'-DIPHOSPHATE(Non-covalent)

GDP.1: 15 residues within 4Å: Chain A: D.13, G.14, A.15, C.16, G.17, K.18, T.19, C.20, A.61, K.118, D.120, L.121, S.160, A.161, K.162 14 PLIP interactions: 14 interactions with chain A Hydrogen bonds: A:A.15, A:C.16, A:G.17, A:K.18, A:T.19, A:T.19, A:C.20, A:K.118, A:K.118, A:A.161, A:K.162 Water bridges: A:L.21 Salt bridges: A:K.18, A:D.120

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 4 residues within 4Å: Chain A: Y.66, D.67, R.68, L.69 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:D.67, A:R.68, A:L.69 Water bridges: A:D.65 Salt bridges: A:R.68

1 x NDG: 2-acetamido-2-deoxy-alpha-D-glucopyranose(Post Translational Modification)

NDG.3: 4 residues within 4Å: Chain A: Y.34, V.35, P.36, T.37 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:T.37 Water bridges: A:K.27, A:V.35

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Jank, T. et al., Tyrosine glycosylation of Rho by Yersinia toxin impairs blastomere cell behaviour in zebrafish embryos. Nat Commun (2015)

Release Date

2015-07-22

Peptides

TRANSFORMING PROTEIN RHOA: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

TRANSFORMING PROTEIN RHOA

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